Basic Information
Symbol
hsa_AFF1_0005800
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0116
Host gene
AFF1
Type of circRNA
Intron-Intron
Location (GRCh37)
4:87973871-87974181
UCSC (hg19)
Location (GRCh38)
4:87052719-87053029
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-83.50 kcal/mol
Thermodynamic ensemble
Free Energy:
-88.12 kcal/mol
Frequency:
0.0006
Diversity:
26.11
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((.(((.(((((.....(((..((((((.(((((((((((((.......)))))))))))))............(.(((((..((((((..((((((..((...))..))))))....))))))...))))).).((((.((((((((((..((.((.(.........).)).))...))))))))))...)))).....(((((......)))))))))))..)))....(((((((....(((((.......))))))))))))........)))))...))).))(((.(((((......))))))))
Thermodynamic Ensemble Prediction
((.(((.(((((..{{.(((..((((((.(((((((((((((.......)))))))))))))..........{,{.(((((..((((((,.((((((..((...))..)))))).,..))))))...))))).),((((.{(((((((((..((.((.(.........).)).))...))))))))))...)))).....(((((......)))))))))))..)))....(((((((....(((((.{....}))))))))))))...,},..)))))...))).))(((.(((((......))))))))
Forensic Context
No forensic context available.