Basic Information
Symbol
hsa_AFF1_0006200
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0093
Host gene
AFF1
Type of circRNA
Intron-Intron
Location (GRCh37)
4:87988408-87988605
UCSC (hg19)
Location (GRCh38)
4:87067256-87067453
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-29.30 kcal/mol
Thermodynamic ensemble
Free Energy:
-33.56 kcal/mol
Frequency:
0.0010
Diversity:
73.90
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((.((((...((.((((....(((((..(((((..(((.(((...))).)))..)))))............((((.(((..((....(((....((((.((((.((((....)))).)))))))).)))....)).....)))))))..)))))......)))).)))))).)))))(..(((....)))....)
Thermodynamic Ensemble Prediction
((((({(((({{{((.{((({,,.{{,,,..{{{,,..|||}|||}}.,,,.)))..)))))}}.....,{{,.,,|,|||......,,{(((,{{,((({.((((.((({....}))}.}}})}}||,..,.}},}}}|,,,}})},|)||}}})}..,,,,},,,.}},,,..))))){,.{{{....))}....)
Forensic Context
No forensic context available.