Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_FAT3_0011100

RNA Class

transcript (circRNA)

Alias

hsa-FAT3_0083

Host gene

FAT3

Type of circRNA

Intron-Intron

Location (GRCh37)

11:92520482-92520768 UCSC (hg19)

Location (GRCh38)

11:92787316-92787602 UCSC (hg38)

External Database

circbank

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-44.10 kcal/mol

Thermodynamic ensemble

Free Energy: -51.02 kcal/mol

Frequency: 0.0000

Diversity: 77.63

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((......))))).....(((((((((..((((((((((((.(.(......((((.((((.....)))).))))......).))))))..)))))))((((((..((....))..)).))))(((((..((((.....))))...))))).(((..((((......))))..)))......((((.((.((..(((((......(((.....))).........)))))..)).)).))))..........((((.(((...))))))))))).)))))

Thermodynamic Ensemble Prediction

.....(((((......))))).....((((((((({.{((((({(((({{(.{...,,,({((.((((.....}))).))))..,...}.))))))..})))))}.,{{{{.,({....)}..}}.|||{(({((,.{(((.....||||...,}}}}},|||(((((((((.......{(((({{,,{,{{..{{.{|,,|||,,......{{{..,..)||.........)))))},,,.,,..))))))))}....||||.|||,,.),,}))))))).)))))

Basic Information

Secondary Structure

Structure Prediction

Forensic Context