Basic Information

Symbol
hsa-mir-1249
RNA class
miRNA miRNA hairpin
Alias
MIR1249 MicroRNA 1249 Hsa-MiR-1249-3p Hsa-Mir-1249 MIRN1249 Hsa-Mir-1249_pre Hsa-MiR-1249-5p MIMAT0032029 MIMAT0005901 MI0006384
Location (GRCh38)
15:88608107-88608197
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Cause of death analysis
External database
HGNC NCBI Ensembl miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-1249
Sequence length
66 nt
GC content
0.6515

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-32.80 kcal/mol
Thermodynamic ensemble
Free energy: -33.78 kcal/mol
Frequency: 0.2031
Diversity: 10.65
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.(((((((((.((.((.((((...(((((........))))))))).)).))))))))))).....
Thermodynamic Ensemble Prediction
{(((((((((.((.((.((((...(((((........))))))))).)),)}))))))))).},..
Forensic Context

A study in mice demonstrated that the mir-1249-3p was upregulated in plasma following low-dose radiation exposure (10 mGy or 100 mGy) in aged subjects [Jia et al. DOI:10.3389/fcell.2022.861451].