Basic Information

Symbol
hsa-mir-4800
RNA class
miRNA miRNA hairpin
Alias
MIR4800 MicroRNA 4800 Hsa-Mir-4800 Hsa-MiR-4800-5p Hsa-MiR-4800-3p MIMAT0019979 MIMAT0019978 MI0017448 Mir-4800
Location (GRCh38)
4:2250077-2250156
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Sudden cardiac death diagnosis Other applications
External database
HGNC NCBI Ensembl miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-4800
Sequence length
80 nt
GC content
0.5875

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-33.30 kcal/mol
Thermodynamic ensemble
Free energy: -34.55 kcal/mol
Frequency: 0.1316
Diversity: 4.31
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((.(((.((((((.(((((.(((.((((((((....))))).))).))).))).)).))))))...))).))..)))
Thermodynamic Ensemble Prediction
((({{.(((,((((((.(((((.(((.((((((((....))))).))).))).))).)).)))))).,.))).}}..)))
Forensic Context

A study in humans with coronary artery disease identified the mir-4800-3p as significantly upregulated in whole blood of patients with recurrent myocardial infarction after percutaneous coronary intervention, with this association remaining significant after false-discovery rate correction (FDR <0.1) [Onuoha et al. DOI:10.1111/cts.13307]. A separate review of human skin conditions reported that the mir-4800-3p was downregulated in hypertrophic scar tissue compared to normal skin [Siu et al. DOI:10.1111/wrr.13100].