Basic Information

Symbol
hsa-mir-5009
RNA class
miRNA miRNA hairpin
Alias
MIR5009 MicroRNA 5009 Hsa-Mir-5009 Hsa-MiR-5009-5p MIMAT0021042 MIMAT0021041 MI0017877
Location (GRCh38)
10:48985512-48985587
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Cause of death analysis
External database
HGNC NCBI Ensembl miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-5009
Sequence length
100 nt
GC content
0.3400

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-31.10 kcal/mol
Thermodynamic ensemble
Free energy: -34.06 kcal/mol
Frequency: 0.0082
Diversity: 10.97
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
........(((((((((.((((((((((..(((((((((((.(((.............)))))))))))))))))))))))).))))))).)).......
Thermodynamic Ensemble Prediction
........,{(((((((.(((((((((,.,(((((((((((((((.............)))))))))))))))))))))))).))))))).,,.......
Forensic Context

A study in humans identified hsa-miR-5009-5p as a differentially expressed microRNA that was downregulated in sepsis compared to septic shock patients [Li et al. DOI: 10.1038/s41598-025-89946-6].