Basic Information

Symbol
hsa-mir-5090
RNA class
miRNA miRNA hairpin
Alias
MIR5090 MicroRNA 5090 Hsa-Mir-5090 Hsa-MiR-5090 MIMAT0021082 MI0017979 Mir-5090
Location (GRCh38)
7:102465742-102465826
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Cause of death analysis
External database
HGNC NCBI Ensembl miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-5090
Sequence length
85 nt
GC content
0.6353

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-34.40 kcal/mol
Thermodynamic ensemble
Free energy: -35.81 kcal/mol
Frequency: 0.1010
Diversity: 9.46
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((((....((((((((..(((.(((((.((...........)).))))).))).))))))))........)))..))))).
Thermodynamic Ensemble Prediction
,(((((((....((((((((..(((.(((((.((...........)).))))).))).))))))))......,.)}},.})))}.
Forensic Context

A study in human lymphoblastoid AHH-1 cells demonstrated that the mir-5090 is dose-dependently upregulated at 24 hours post-irradiation (0-8/10 Gy) following ionizing radiation exposure [Song et al. DOI:10.3390/life10120361].