Basic Information

Symbol
hsa-mir-517c
RNA class
miRNA miRNA hairpin
Alias
MIR517C MicroRNA 517c Hsa-MiR-517-5p Hsa-Mir-517c MIRN517C Hsa-Mir-430-P35c_pre Hsa-MiR-517c-3p MIMAT0002866 MIMAT0002851 MI0003174
Location (GRCh38)
17:17813836-17813931
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Forensic psychiatry evaluation
External database
HGNC NCBI Ensembl OMIM miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-517c
Sequence length
95 nt
GC content
0.4211

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-43.80 kcal/mol
Thermodynamic ensemble
Free energy: -44.94 kcal/mol
Frequency: 0.1563
Diversity: 3.53
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.....((((((((((((((.(((((((.(((.((((.((((.............)))).)))).))).))))))).)))))))))))))).....
Thermodynamic Ensemble Prediction
.....((((((((((((((.(((((((.(((.((((.((((.,{.......},.)))).)))).))).))))))).)))))))))))))).....
Forensic Context

A study in humans demonstrated that the mir-517c was significantly decreased in the prefrontal cortex of depressed suicide subjects compared to non-psychiatric controls [Smalheiser et al. DOI:10.1371/journal.pone.0033201].