Basic Information

Symbol
hsa-mir-5193
RNA class
miRNA miRNA hairpin
Alias
MIR5193 MicroRNA 5193 Hsa-Mir-5193 MIMAT0021124 Hsa-MiR-5193 MI0018172 Mir-5193
Location (GRCh38)
3:49806137-49806245
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Tissue/body fluid identification
External database
HGNC NCBI Ensembl miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-5193
Sequence length
109 nt
GC content
0.5596

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-55.30 kcal/mol
Thermodynamic ensemble
Free energy: -56.74 kcal/mol
Frequency: 0.9459
Diversity: 0.19
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((..(((((((((((((((((((((((...((((((((...(((....)))..))))))))...))))))))))))).....)))...))))).))))))))).
Thermodynamic Ensemble Prediction
(((((({.,(((((((((.(((((((((((((...((((((((...(((....)))..))))))))...))))))))))))))),..,,,...})))).))))))))).
Forensic Context

A study in humans identified the mir-5193 as an absolute specific marker for venous blood, demonstrating high specificity in all five pairwise comparisons with other body fluids/tissues [Liu et al. DOI:10.3390/genes13091530].