Basic Information

Symbol
hsa-mir-520e
RNA class
miRNA miRNA hairpin
Alias
MIR520E MicroRNA 520e Hsa-Mir-520e MIRN520E Hsa-Mir-430-P25_pre Hsa-MiR-520e-5p Hsa-MiR-520e-3p MIMAT0002825 MIMAT0037324 Hsa-MiR-520e MI0003143
Location (GRCh38)
19:53675711-53675797
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Mechanical injury analysis
External database
HGNC NCBI Ensembl OMIM miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-520e
Sequence length
87 nt
GC content
0.4368

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-44.40 kcal/mol
Thermodynamic ensemble
Free energy: -45.75 kcal/mol
Frequency: 0.1116
Diversity: 4.84
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((..((.(((((((((((((.(((((((.(((((....(((...)))..))))).))))))).))))))))))))).))..))))
Thermodynamic Ensemble Prediction
{(((..((.(((((((((((((.(((((((.(((((..,.({,...,}),.))))).))))))).))))))))))))).))..)))}
Forensic Context

A study in humans demonstrated that the mir-520e is upregulated in the serum of chronic mild traumatic brain injury patients [Li et al. DOI:10.1016/j.neuint.2023.105643].