Basic Information

Symbol
hsa-mir-548c
RNA class
miRNA miRNA hairpin
Alias
MIR548C MicroRNA 548c Hsa-MiR-548c-5p Hsa-Mir-548c Hsa-MiR-548am-5p Hsa-MiR-548o-5p MIRN548C Hsa-MiR-548c-3p MIMAT0004806 MIMAT0003285 MI0003630
Location (GRCh38)
12:64622509-64622605
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Other applications
External database
HGNC NCBI Ensembl miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-548c
Sequence length
97 nt
GC content
0.3402

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-47.10 kcal/mol
Thermodynamic ensemble
Free energy: -47.75 kcal/mol
Frequency: 0.3464
Diversity: 3.96
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
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Thermodynamic Ensemble Prediction
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Forensic Context

A study in humans demonstrated that the mir-548c-3p was significantly differentially expressed depending on sex in peripheral blood from physiologically unaffected individuals, with this finding being concordant across both a microarray cohort and a high-throughput sequencing validation cohort [Meder et al. DOI:10.1373/clinchem.2014.224238].