Basic Information

Symbol
hsa-mir-548u
RNA class
miRNA miRNA hairpin
Alias
MIR548U MicroRNA 548u Hsa-Mir-548u MIMAT0015013 Hsa-MiR-548u MI0014168
Location (GRCh38)
X:74218547-74218618
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Wound age identification Cause of death analysis
External database
HGNC NCBI Ensembl miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-548u
Sequence length
81 nt
GC content
0.3333

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-36.20 kcal/mol
Thermodynamic ensemble
Free energy: -37.55 kcal/mol
Frequency: 0.6346
Diversity: 0.62
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((.((((((((((((((((((((((((.((.(((....))).)).))))))))).))))))))))))))).))))))
Thermodynamic Ensemble Prediction
{(((((.((((((((((((((((((((((((.((.(({....})).)).)))))))))},)))))))))))))).)))))}
Forensic Context

A study in human skin epidermal stem cells demonstrated that the mir-548u was upregulated 6 hours post-burn in heat-shocked cells compared to controls [Siu et al. DOI:10.1111/wrr.13100].