Basic Information

Symbol
hsa-mir-549a
RNA class
miRNA miRNA hairpin
Alias
MIR549A MicroRNA 549a Hsa-Mir-549 MicroRNA 549 MIRN549 MIR549 Hsa-MiR-549a-5p Hsa-MiR-549a-3p Hsa-Mir-549a MIMAT0003333 MIMAT0037328 MI0003679 Mir-549a
Location (GRCh38)
X:134546328-134546398
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Mechanical injury analysis Wound age identification
External database
HGNC NCBI Ensembl miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-549a
Sequence length
96 nt
GC content
0.3958

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-53.70 kcal/mol
Thermodynamic ensemble
Free energy: -54.80 kcal/mol
Frequency: 0.1691
Diversity: 3.54
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
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Thermodynamic Ensemble Prediction
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Forensic Context

A review of human studies identified the mir-549a as upregulated six hours post-burn in heat-shocked skin epidermal stem cells compared to controls [Siu et al. DOI:10.1111/wrr.13100].