Basic Information

Symbol
hsa-mir-1277
RNA class
miRNA miRNA hairpin
Alias
MIR1277 MicroRNA 1277 Hsa-MiR-1277-5p Hsa-MiR-1277-3p Hsa-Mir-1277 MIRN1277 Hsa-Mir-1277_pre MIMAT0022724 MIMAT0005933 MI0006419
Location (GRCh38)
5:176367946-176368031
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Tissue/body fluid identification
External database
HGNC NCBI Ensembl miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-1277
Sequence length
78 nt
GC content
0.2564

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-31.90 kcal/mol
Thermodynamic ensemble
Free energy: -32.84 kcal/mol
Frequency: 0.2164
Diversity: 3.53
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
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Thermodynamic Ensemble Prediction
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Forensic Context

A study in humans using massively parallel sequencing on the BGISEQ-500 platform identified the mir-1277-3p as an absolute specific marker (ASM) for venous blood, demonstrating high specificity in all five pairwise comparisons with other body fluids/tissues [Liu et al. DOI:10.3390/genes13091530].