Basic Information

Symbol
hsa-mir-6516
RNA class
miRNA miRNA hairpin
Alias
MIR6516 MicroRNA 6516 Hsa-Mir-6516 MicroRNA Mir-6516 Hsa-MiR-6516-3p Hsa-MiR-6516-5p MIMAT0030418 MIMAT0030417 MI0025513
Location (GRCh38)
17:77089417-77089497
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Wound age identification
External database
HGNC NCBI Ensembl miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-6516
Sequence length
81 nt
GC content
0.4074

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-28.30 kcal/mol
Thermodynamic ensemble
Free energy: -29.84 kcal/mol
Frequency: 0.0819
Diversity: 4.65
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((((..(((((((((.((..(((((.((((..(((....))).)))).)))))..)).))))))))))))))))))
Thermodynamic Ensemble Prediction
{((((((((..(((((((((.((..{((((.((((,.(((....))).)))).))))}..)).)))))))))))))))))}
Forensic Context

A study in humans demonstrated that the mir-6516-3p was upregulated in venous ulcers compared to normal skin and acute wounds [Siu et al. DOI:10.1111/wrr.13100].