Basic Information

Symbol
hsa-mir-6883
RNA class
miRNA miRNA hairpin
Alias
MIR6883 MicroRNA 6883 Hsa-Mir-6883 MicroRNA Mir-6883 MIMAT0027667 MIMAT0027666 MI0022730
Location (GRCh38)
17:8144994-8145071
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Time since deposition estimation
External database
HGNC NCBI Ensembl miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-6883
Sequence length
78 nt
GC content
0.5256

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-25.30 kcal/mol
Thermodynamic ensemble
Free energy: -26.65 kcal/mol
Frequency: 0.1110
Diversity: 7.82
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
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Thermodynamic Ensemble Prediction
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Forensic Context

A study in humans developed a targeted RNA sequencing protocol to predict the time-of-day of bloodstain deposition using 69 candidate mRNA markers, achieving a root mean squared error of 3 hours and 44 minutes with 78% of predictions correct within ±4 hours via five-fold cross-validation [Gosch et al. DOI:10.1016/J.Fsigen.2025.103287]. mir-6883 was identified as a candidate in previous whole transcriptome sequencing but was not included in this study's targeted panel as it required a different sequencing approach.