Basic Information

Symbol
hsa-mir-889
RNA class
miRNA miRNA hairpin
Alias
MIR889 MicroRNA 889 Hsa-Mir-889 Hsa-MiR-889-3p MIRN889 Hsa-Mir-154-P27_pre Hsa-MiR-889-5p MIMAT0026719 MIMAT0004921 MI0005540 Mir-889
Location (GRCh38)
6:30584332-30584417
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Cause of death analysis
External database
HGNC NCBI Ensembl miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-889
Sequence length
79 nt
GC content
0.3544

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-24.80 kcal/mol
Thermodynamic ensemble
Free energy: -26.69 kcal/mol
Frequency: 0.0465
Diversity: 9.37
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((.(((.(((((.((((((..((.(((((((.........)).)))))))..)))))).))))).))).)))))..
Thermodynamic Ensemble Prediction
(((((.(((.(((((.((((((..{{,(((((((.,.....,.)).))))},),,)))))).))))).))).)))))..
Forensic Context

A study in humans identified the mir-889-3p as a potential biomarker predicted to bind hsa_circRNA_104161, a circRNA that was up-regulated and co-differentially expressed in both plasma and lung tissue from sepsis-induced ARDS patients [Guo et al. DOI:10.1016/j.lfs.2021.119566].