Basic Information

Symbol
hsa-mir-9-1
RNA class
miRNA miRNA hairpin
Alias
MIR9-1 MicroRNA 9-1 Hsa-MiR-9-5p Hsa-MiR-9-3p Hsa-Mir-9-1 MIRN9-1 Hsa-Mir-9-P3_pre MIMAT0000442 MIMAT0000441 MI0000466 MiRNA9-1 Mir-9-1
Location (GRCh38)
14:101040219-101040299
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Tissue/body fluid identification Other applications
External database
HGNC NCBI Ensembl OMIM miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-9-1
Sequence length
89 nt
GC content
0.4045

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-41.00 kcal/mol
Thermodynamic ensemble
Free energy: -42.37 kcal/mol
Frequency: 0.1075
Diversity: 6.28
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.(((((((....((((.(((((((((((((((.((((((.(.(....).).)))))).))))))))))))))).))))...))))))).
Thermodynamic Ensemble Prediction
.(((((((.,,.((((.(((((((((((((((.((((((.(.{....,.},)))))).))))))))))))))).)))).,,))))))).
Forensic Context

A study in human samples demonstrated that mir-9-1 exhibited considerably higher expression in pooled brain tissue, identifying it as a promising marker for brain identification [Sauer et al. DOI:10.1016/j.fsigen.2017.02.002]. A study in rhesus macaques demonstrated that the mir-9-1 was utilized as a feature in a Day 21 pleural effusion prediction model by gender, which was developed to forecast complications following whole thorax irradiation [May et al. DOI:10.1038/s41598-022-16316-x].