Basic Information

Symbol
hsa-mir-9-3
RNA class
miRNA miRNA hairpin
Alias
MIR9-3 MicroRNA 9-3 Hsa-MiR-9-5p Hsa-MiR-9-3p Hsa-Mir-9-3 MIRN9-3 Hsa-Mir-9-P1_pre MIMAT0000442 MIMAT0000441 MI0000468 MiRNA9-3 Mir-9-3 hsa-mir-9
Location (GRCh38)
15:89368017-89368106
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Tissue/body fluid identification
External database
HGNC NCBI Ensembl OMIM miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-9-3
Sequence length
90 nt
GC content
0.4444

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-41.70 kcal/mol
Thermodynamic ensemble
Free energy: -42.35 kcal/mol
Frequency: 0.3487
Diversity: 3.62
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.((((..(((((((((.(((((((((((((((.(((((..((......))..))))).))))))))))))))))).)))))))..)))).
Thermodynamic Ensemble Prediction
.((((..((((((({(.(((((((((((((((.(((((..((......))..))))).))))))))))))))))).)))))))..)))).
Forensic Context

A study in human forensic samples demonstrated that hsa-miR-9-5p exhibited considerably higher expression in pooled brain samples, identifying it as a promising marker for brain tissue identification [Sauer et al. DOI:10.1016/j.fsigen.2017.02.002].