Basic Information

Symbol
hsa-mir-138-1
RNA class
miRNA miRNA hairpin
Alias
MIR138-1 MicroRNA 138-1 Hsa-MiR-138-1-3p Hsa-MiR-138-5p Hsa-Mir-138-1 MIRN138-1 Hsa-Mir-138-P1_pre MIMAT0004607 MIMAT0000430 Mir-138-1 MI0000476
Location (GRCh38)
5:32394378-32394475
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Mechanical injury analysis
External database
HGNC NCBI Ensembl OMIM miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-138-1
Sequence length
99 nt
GC content
0.5859

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-58.90 kcal/mol
Thermodynamic ensemble
Free energy: -59.53 kcal/mol
Frequency: 0.3613
Diversity: 2.05
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
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Thermodynamic Ensemble Prediction
.((((...((((((((((.(((..(((((((((((((...(((((((..{.....)..)))))))..))))))))))))).))).))))))))))))))
Forensic Context

A study in rats demonstrated that the mir-138-1 is upregulated in the hippocampus at all time points from 1 hour to 7 days following moderate traumatic brain injury, identifying it as a potential biomarker for the condition [Martinez & Peplow DOI:10.4103/1673-5374.219025].