Basic Information

Symbol
hsa-mir-1539
RNA class
miRNA miRNA hairpin
Alias
MIR1539 MicroRNA 1539 Hsa-Mir-1539 MIRN1539 MIMAT0007401 Hsa-MiR-1539 MI0007260
Location (GRCh38)
18:49487373-49487422
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Sudden cardiac death diagnosis
External database
HGNC NCBI Ensembl miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-1539
Sequence length
50 nt
GC content
0.7000

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-23.10 kcal/mol
Thermodynamic ensemble
Free energy: -23.55 kcal/mol
Frequency: 0.4794
Diversity: 3.10
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((.(((.((((((..((......)))))))).))).)))).))).
Thermodynamic Ensemble Prediction
(((((((.(((.((((((..((......)))))))).))).)))).))).
Forensic Context

A study in humans demonstrated that the mir-1539 was upregulated in whole blood of patients with recurrent myocardial infarction after percutaneous coronary intervention compared to those without recurrent events, with this differential expression remaining significant after false discovery rate correction (FDR <0.1) [Onuoha et al. DOI:10.1111/cts.13307].