Basic Information

Symbol
hsa-mir-196a-1
RNA class
miRNA miRNA hairpin
Alias
MIR196A1 MicroRNA 196a-1 Hsa-MiR-196a-5p Hsa-Mir-196a-1 Hsa-Mir-196-1 MicroRNA 196-1 MicroRNA 196a MIRN196-1 MIRN196A1 Hsa-Mir-196-P3_pre Hsa-MiR-196a-1-3p MicroRNA MiR-196 MIMAT0000226 MIMAT0037307 Mir-196a-1 MI0000238
Location (GRCh38)
15:62823957-62824041
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Other applications
External database
HGNC NCBI Ensembl OMIM miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-196a-1
Sequence length
70 nt
GC content
0.4286

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-24.80 kcal/mol
Thermodynamic ensemble
Free energy: -26.25 kcal/mol
Frequency: 0.0955
Diversity: 4.01
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((.(((.((((.((((((((((..(.........)..).))))))))).)))).))).)))))))
Thermodynamic Ensemble Prediction
(((((((.(((.((((.((((((((({..,.{{....)}}..}.))))))))).)))).))).)))))))
Forensic Context

A study in rhesus macaques following whole thorax irradiation identified the mir-196a-1 as a feature in a dose-prediction model at Day 3 post-exposure [May et al. DOI:10.1038/s41598-022-16316-x].