Basic Information

Symbol
hsa-mir-2116
RNA class
miRNA miRNA hairpin
Alias
MIR2116 MicroRNA 2116 Hsa-MiR-2116-5p Hsa-MiR-2116-3p Hsa-Mir-2116 Hsa-Mir-2116_pre MIMAT0011161 MIMAT0011160 MI0010635 Mir-2116
Location (GRCh38)
8:140732564-140732653
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Wound age identification
External database
HGNC NCBI Ensembl miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-2116
Sequence length
80 nt
GC content
0.5250

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-41.60 kcal/mol
Thermodynamic ensemble
Free energy: -41.97 kcal/mol
Frequency: 0.5456
Diversity: 2.17
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
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Thermodynamic Ensemble Prediction
..(((((.((.(((((((((.((((.(((((.((((.........)))).))))).)))).))))))))).)).))))).
Forensic Context

A study in humans demonstrated that the mir-2116-3p was upregulated 6 hours post-burn in heat-shocked skin epidermal stem cells compared to controls [Siu et al. DOI:10.1111/wrr.13100].