Basic Information

Symbol
hsa-mir-218-1
RNA class
miRNA miRNA hairpin
Alias
MIR218-1 MicroRNA 218-1 Hsa-MiR-218-1-3p Hsa-MiR-218-5p Hsa-Mir-218-1 MIRN218-1 Hsa-Mir-218-P2_pre MIMAT0000275 MIMAT0004565 Mir-218-1 MI0000294 hsa-mir-218
Location (GRCh38)
Forensic tag(s)
Wound age identification Mechanical injury analysis Sudden cardiac death diagnosis Forensic psychiatry evaluation

Sequence & Structure

Transcript ID
hsa-mir-218-1
Sequence length
110 nt
GC content
0.4455

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-40.00 kcal/mol
Thermodynamic ensemble
Free energy: -41.53 kcal/mol
Frequency: 0.0830
Diversity: 5.45
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((..((.((.(((.(((.((((((.(((((((((..((((((((..((((.........)))).))))))))..))))))))).)))))).))).))).))))..))).
Thermodynamic Ensemble Prediction
(((..,,.((.(((.(((.((((((.(((((((((..((((((((..((((.........)))).))))))))..))))))))).)))))).))).))).)).,,.})).
Forensic Context

A study in humans demonstrated that the mir-218 was downregulated in denatured dermis from deep partial thickness burn patients compared to paired normal skin, with a 0.1801-fold change [Liang et al. DOI:10.1016/j.burns.2011.10.014], and it was also downregulated 4 days post-burn in deep partial thickness burn skin versus normal skin and 24 hours post-injury in skin wounds versus unwounded skin [Siu et al. DOI:10.1111/wrr.13100]. A review of human postmortem brain studies found the mir-218 is downregulated in the dorsolateral prefrontal cortex in schizophrenia and in the anterior cingulate cortex in bipolar disorder, while it is upregulated in the locus coeruleus of major depressive disorder suicide subjects and downregulated in synaptosomes of Brodmann area 10 from suicide subjects across diagnoses [Yoshino & Dwivedi DOI:10.3389/fpsyt.2020.543893]. In a separate human study on dilated cardiomyopathy, miR-218-5p was upregulated in left ventricular biopsies from volume overload cardiomyopathy compared to ischemic cardiomyopathy, and its direct targeting of DDX6 and SEMA4A was validated by luciferase assay [Bonet et al. DOI:10.3390/biom14050524].