Basic Information

Symbol
hsa-mir-3117
RNA class
miRNA miRNA hairpin
Alias
MIR3117 MicroRNA 3117 Hsa-MiR-3117-5p Hsa-Mir-3117 Hsa-MiR-3117-3p MIMAT0014979 MIMAT0019197 MI0014130 Mir-3117
Location (GRCh38)
5:181222566-181222633
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Wound age identification
External database
HGNC NCBI Ensembl miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-3117
Sequence length
78 nt
GC content
0.4615

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-30.10 kcal/mol
Thermodynamic ensemble
Free energy: -31.26 kcal/mol
Frequency: 0.1516
Diversity: 3.46
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
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Thermodynamic Ensemble Prediction
((((((((.(((.(.(((((((.(((((.(((((.{.....).))))).))))).))))))).}.))).))))).)))
Forensic Context

A review of human studies identified the mir-3117-3p as being upregulated in venous ulcers compared to normal skin and acute wounds [Siu et al. DOI:10.1111/wrr.13100].