Basic Information

Symbol
hsa-mir-339
RNA class
miRNA miRNA hairpin
Alias
MIR339 MicroRNA 339 Hsa-MiR-339-5p Hsa-MiR-339-3p Hsa-Mir-339 MIRN339 Hsa-Mir-339_pre MIMAT0000764 MIMAT0004702 MI0000815 Mir-339
Location (GRCh38)
7:1022933-1023026
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Sudden cardiac death diagnosis
External database
HGNC NCBI Ensembl OMIM miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-339
Sequence length
94 nt
GC content
0.7340

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-47.40 kcal/mol
Thermodynamic ensemble
Free energy: -48.31 kcal/mol
Frequency: 0.2289
Diversity: 5.22
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.(((((((.((((..(.(((((.((.(((.(((((((.((....)).))))))).))).)).))))).)..)))).)))))))...........
Thermodynamic Ensemble Prediction
.(((((((.((((..(.(((((.((.(((.(((((((.((....)).))))))).))).)).))))).)..)))).))))))).,,.....,..
Forensic Context

A study in humans demonstrated that the mir-339 was significantly upregulated (2.62 fold) in postischemic left ventricular myocardium following cardioplegic arrest [Saddic et al. DOI:10.1152/physiolgenomics.00049.2015].