Basic Information

Symbol
hsa-mir-3685
RNA class
miRNA miRNA hairpin
Alias
MIR3685 MicroRNA 3685 Hsa-Mir-3685 Hsa-MiR-3685 MIMAT0018113 MI0016086
Location (GRCh38)
12:95309923-95309984
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Tissue/body fluid identification
External database
HGNC NCBI Ensembl miRBase RNAcentral

Sequence & Structure

Transcript ID
hsa-mir-3685
Sequence length
62 nt
GC content
0.4516

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-23.60 kcal/mol
Thermodynamic ensemble
Free energy: -24.73 kcal/mol
Frequency: 0.7129
Diversity: 1.30
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
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Thermodynamic Ensemble Prediction
((((.((,(((({((,.((((((((((.........))))))))))))).)))).)),))))
Forensic Context

A study in humans demonstrated that the mir-3685 was not amplified at all in the RT-qPCR detection system used for body fluid identification, leading to its exclusion from the final probabilistic discriminant model [Fujimoto et al. DOI:10.1038/s41598-019-50796-8].