Basic Information

Symbol
OR5P2
RNA class
mRNA
Alias
Olfactory Receptor Family 5 Subfamily P Member 2 JCG3 Olfactory Receptor-Like Protein JCG3 Olfactory Receptor 5P2 Olfactory Receptor, Family 5, Subfamily P, Member 2 Olfactory Receptor OR11-93 JCG4
Location (GRCh38)
11:7795974-7796942
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Other applications
External database
HGNC NCBI Ensembl UniProt GTEx

MANE select

Transcript ID
NM_153444.1
Sequence length
969.0 nt
GC content
0.4396

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-241.90 kcal/mol
Thermodynamic ensemble
Free energy: -258.95 kcal/mol
Frequency: 0.0000
Diversity: 174.41
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((..(((((..((((((........))).)))..)))))))))).((((((((..((((((((((((.........(((.....))).....)))))))...((((((((.................)))))))).(((((((..(((((((((.((((.(((..........(((((....)))))..((((..(((((.((((((................(((....))).........(((((.((((.......))))))))).)))))).))))).))))..(((((((((((.......))..((((.((.((((((.(((.((.(((((((((........)))..))))))....((((....))))................(((((((.(((..((((.............((((((....(((((.............))))).......)))))).............))))))).))))))).......(((.((((((.......))))))..))).........((((......))))(((((((((((...(((((((.((..((.((........))))...)).))))))).)))))...))))))((((.....)))).....................)).))))))))).)).)))).((((((((((.(((.........))).......((((((...(.((((((....((.(((((((..((((((..........))))))))))....)))..)).....)))))).)...))))))....(((((...)))))))))))..)))).))))))))).(((((.........))))).))))))))))....))))))..))))))).(((((((.(((((.....))))).)))).)))))))).)))))))).........................
Thermodynamic Ensemble Prediction
{((((..(((((..((((((........))).)))..)))))))))}.((((((((..((((,(((((((.........(({...,,}}}.....)))))))...((((((((.................)))))))).(((((((..((((((.........{((((((((((({(((((....))))}.,{,{({((,({.............})}}}||.,..{{{....}))..,,,....)))))))))))))))|(((((((...{((((((...))))))}...(((((((({((.......}}..((((.((.{({({,,{{{.{{,|{{.(((({,{{{{({{((|.,||||},....((((....))))................(((((((.(((..((((.............((((((.,,.(((((,{{......,,..)))))....,,.)))))).............))))))).))))))).......(({.((((((.......))))))..}}}.........((((......)))),{{{{,(((((...(((((((.(...,,,{{........})))...,..))))))).))))).}}),))))}|||}}}..))},..............,,,,,,.,,.}}}))))}|.}}.}}}}.((({({{{{{.{||,........,,}||||,,,((((((...{.((((((....((.(((((((..((((((.,......,.))))))))))....)))..)).....)))))).}...)))))).,.,(((((...))))))))))),,,}}}.,)))))))).(((((.........)))))....)))))))....))))))..))))))){(((((((.(((((.....))))).)))).)))))))).))))))))......,.....}},..........

Transcripts

ID Sequence Length GC content
NM_153444.1 NCBI
AUGAAUUCCCUGAAGGACGGGAAUCACACCGCUCUGACGGGGUUCAUCC… 969 nt 0.4396
Summary

Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]

Forensic Context

A study in the blowfly *Calliphora stygia* identified 50 candidate odorant receptors (ORs) via antennal transcriptome sequencing, including the conserved co-receptor Orco and putative orthologues to pheromone-specific receptors like DmelOR67d, with quantitative differences in transcript abundance observed between sexes [Leitch et al. DOI:10.1186/s12864-015-1466-8].