Basic Information
Symbol
PCP2
RNA class
mRNA
Alias
Purkinje Cell Protein 2
GPSM4
Purkinje Cell Protein 2 Homolog
MGC41903
Purkinje Cell-Specific Protein L7
Purkinje Cell-Specific Protein 2
CTD-3214H19.6
PCD5
Location (GRCh38)
19:7631611-7633719
Forensic tag(s)
Other applications
MANE select
Transcript ID
NM_174895.3
Sequence length
747.0 nt
GC content
0.6171
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-293.40 kcal/mol
Thermodynamic ensemble
Free energy:
-304.31 kcal/mol
Frequency:
0.0000
Diversity:
279.25
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.((((((..((..((((..((.(((......(((((((..(((((((.(((.((((((((((....((((((.((.(((((......))))).))))))))......)))))(((....))))))))))).))))..((((..(((((.((((..(((((((((((((.........))))).(((((((.((((......(((((((((((((.....))))))).)).)))).........((..((((...))))..)).....((.((((.(((.(((((((.(((..(((....)))))).))(((...)))((((.((......)).)))).)))))..))).)))).)))))).)))))))..(((.(((((((.(((.((((((.((((...((((((...((((((....(((.((((((...((..........))...))).....))).))).....))))))....)))..)))...((((((.........)))))).)))).))))))))))))....))))..))).(((((((.((..((...........))..)).)))))))..)))))))))))).)))))))))(((((.(((..........(((((..(((((....((........))..)))))..)))))......)))))))))))..)))))))))).))..)))).))..)).))))..............................
Thermodynamic Ensemble Prediction
.,(((((,{(({.({(,,{(({(,,{{((..,(((,(({{(((((((.{(({((((((((((..,,((((((.((.(((((......))))).)))))))}..,,,.)))))(((....))))))))))),||||,,((((,.{({{({{{((.,(((((({((((((,........))))),|{(({{{||{,,......((((((((({(((,,.,,|||}|||,}}.}}||,,((,.....|,.||||.|||||},.,|.,..|||,||||.,{,.,,,{,{,.,{,..{||}|.|}))},,}})}}}}}|,}|||||}||}},,,.}|.|}})})))))..)))}))},.}},})}})))))))}}},|}.|..{||,|,,}|||||{,,|{|},,||{((({{{(({,(({{,.{{{.((((({,,(((...{,,....,|.|.|||..,|||}}.}||.,.,{|||||}....|}}..||},,,({{{{|,....,,..})}))).,,)),)))))))))}}}}})})))),}}}|||((((((.(({.,,{{{{,......,|.,||{||||,},,.))))),,.,},,})))).,,))|{{||,|||.},,},}}},||{{{..(((((....((........))..)))))..}}}}},...,.))))}))|)}}..)))}))))),.)))})))).,,.....|,,,...,,.............,}}},.......
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| AUUCAGAACAGCUCUGCAGAGAGGAUCGGCGGGGACCAUGGCGGGCUCC… | 474 nt | 0.6287 | |
| AGUCAUUGCUGCUGGGCACAGCGAGGUCCAAGCUCAGGUCGCCCUGCCC… | 747 nt | 0.6171 |
Summary
Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to act upstream of or within G protein-coupled opsin signaling pathway. Predicted to be located in neuronal cell body. [provided by Alliance of Genome Resources, Apr 2025]
Forensic Context
A study in mice demonstrated that the PCP2 was the most significantly upregulated gene exclusively after formalin-induced inflammatory pain treatment, as identified via RNA sequencing of the primary somatosensory cortex [Erdei et al. DOI:10.3390/ijms26083538].