Basic Information

Symbol
PTPRK
RNA class
mRNA
Alias
Protein Tyrosine Phosphatase Receptor Type K R-PTP-Kappa Receptor-Type Tyrosine-Protein Phosphatase Kappa Protein-Tyrosine Phosphatase Kappa EC 3.1.3.48 DJ480J14.2.1 (Protein Tyrosine Phosphatase, Receptor Type, K (R-PTP-KAPPA, Protein Tyrosine Phosphatase Kappa , Protein Tyrosine Phosphatase Kappa Protein-Tyrosine Phosphatase, Receptor Type, Kappa PTPK
Location (GRCh38)
Forensic tag(s)
Sudden cardiac death diagnosis

MANE select

Transcript ID
NM_002844.4
Sequence length
6006.0 nt
GC content
0.4357

Transcripts

ID Sequence Length GC content
ACUAACAGGAGCAGCCUCCGCCGAGCAUGGAGAGCUGCCGCCGCGGCCG… 6024 nt 0.4358
ACUAACAGGAGCAGCCUCCGCCGAGCAUGGAGAGCUGCCGCCGCGGCCG… 6072 nt 0.4359
ACUAACAGGAGCAGCCUCCGCCGAGCAUGGAGAGCUGCCGCCGCGGCCG… 3162 nt 0.4633
ACUAACAGGAGCAGCCUCCGCCGAGCAUGGAGAGCUGCCGCCGCGGCCG… 2932 nt 0.4628
ACUAACAGGAGCAGCCUCCGCCGAGCAUGGAGAGCUGCCGCCGCGGCCG… 6003 nt 0.4356
ACUAACAGGAGCAGCCUCCGCCGAGCAUGGAGAGCUGCCGCCGCGGCCG… 6006 nt 0.4357
Summary

The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. This PTP possesses an extracellular region, a single transmembrane region, and two tandem catalytic domains, and thus represents a receptor-type PTP. The extracellular region contains a meprin-A5 antigen-PTP mu (MAM) domain, an Ig-like domain and four fibronectin type III-like repeats. This PTP was shown to mediate homophilic intercellular interaction, possibly through the interaction with beta- and gamma-catenin at adherens junctions. Expression of this gene was found to be stimulated by TGF-beta 1, which may be important for the inhibition of keratinocyte proliferation. [provided by RefSeq, Jul 2008]

Forensic Context

A study in humans identified ENST00000368226.8 as a downregulated mRNA in peripheral blood mononuclear cells from patients with ST-elevation myocardial infarction compared to those with non-ST-elevation myocardial infarction, with a fold change of 3.97, and it was classified as a diagnostic biomarker for acute myocardial infarction [Zhong et al. DOI:10.1097/MD.0000000000013066].