Basic Information

Symbol
SCGB3A1
RNA class
mRNA
Alias
Secretoglobin Family 3A Member 1 PnSP-2 UGRP2 HIN1 Pneumo Secretory Protein 2 HIN-1 LU105 Uteroglobin-Related Protein 2 Cytokine High In Normal-1 High In Normal 1 Cytokine HIN-1 PNSP2
Location (GRCh38)
5:180590105-180591499
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
-
External database
HGNC NCBI Ensembl OMIM UniProt GTEx

MANE select

Transcript ID
NM_052863.3
Sequence length
478.0 nt
GC content
0.6946

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-222.30 kcal/mol
Thermodynamic ensemble
Free energy: -231.30 kcal/mol
Frequency: 0.0000
Diversity: 97.27
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((((.(((...(((((...........)))))...))).))....((((((.((((.....((((.....(((((((((((...)))))((((((.....(.((((((((((((((((((((.(((((....(((((((.(((((((((((.((..(((((((((((....)))))).......)))))..)).....))))))..))))).))...)))))(((((.(.((((((((......)))).).))).))))))........))))).)))(((((((((((((.(.((((((.....)))))).).))))....)))))))))..)))).))))))))))))).)....))))))..........))))))..))))......)))).))))))..........((((.(((((((............)))))))))))..............)))))).......
Thermodynamic Ensemble Prediction
{((((({(,{{{.,,(((((....,,{,,..}|}|}...}},.)},}..{{{{{{.,|||||.,.||||,,...(((((((((((...}}}))((({{{{,,..{.((((((((((((((((((((.(((((...,(((((((.(((((((((((.{(,{(((((((((((....)))))}.....,})))))..)),,...)))))),.})))).))...)))))(((((.,.(((,((((......)))).}.))).,)))))........))))).)))(((((((((((((.{.((((((.....)))))).}.))))....)))))))))..)))).))))))))))))).}.,..)))))).........,)))))).,}})).}|,}.}}}}.)})))).,........((((.(((((((...........,))))))}))))..............)))))}.......

Transcripts

ID Sequence Length GC content
NM_052863.3 NCBI
AGCCGCAGGUUCCCCGCGCGCCCCGAGCCCCCGCGCCAUGAAGCUCGCC… 478 nt 0.6946
Summary

Predicted to enable cytokine activity. Predicted to be involved in positive regulation of myoblast fusion. Located in extracellular space. [provided by Alliance of Genome Resources, Jul 2025]

Forensic Context

No relevant information is available at the moment.