| ID | Sequence | Length | GC content |
|---|---|---|---|
| GCAGACGGCGGAGUAACCGGUGGAAGUGUCAAAGAGGAAGGAGUGGAGG… | 6040 nt | 0.4384 | |
| GUCCCGCUGCUGCUGCUGCUGCUGCAAGGGGUGGUGGCGAGUUUCAGGA… | 5907 nt | 0.4227 | |
| GUCCCGCUGCUGCUGCUGCUGCUGCAAGGGGUGGUGGCGAGUUUCAGGA… | 5939 nt | 0.4228 | |
| AGAGCCAGCUCGGCGUCCCCCGCACAUAGCUGGGGUUAGCAGGGGUUGC… | 6308 nt | 0.4564 | |
| AGAGCCAGCUCGGCGUCCCCCGCACAUAGCUGGGGUUAGCAGGGGUUGC… | 2698 nt | 0.5093 | |
| AGAGCCAGCUCGGCGUCCCCCGCACAUAGCUGGGGUUAGCAGGGGUUGC… | 6269 nt | 0.4565 | |
| AGAGCCAGCUCGGCGUCCCCCGCACAUAGCUGGGGUUAGCAGGGGUUGC… | 6326 nt | 0.4557 | |
| AGAGCCAGCUCGGCGUCCCCCGCACAUAGCUGGGGUUAGCAGGGGUUGC… | 6494 nt | 0.4544 | |
| GCGGCCGCUUCCCACCGUCCCUCUCCCCUUACUGGCAGAGCGCGCUGCG… | 5919 nt | 0.4367 |
Semaphorins are a large family, including both secreted and membrane associated proteins, many of which have been implicated as inhibitors or chemorepellents in axon pathfinding, fasciculation and branching, and target selection. All semaphorins possess a semaphorin (Sema) domain and a PSI domain (found in plexins, semaphorins and integrins) in the N-terminal extracellular portion. Additional sequence motifs C-terminal to the semaphorin domain allow classification into distinct subfamilies. Results demonstrate that transmembrane semaphorins, like the secreted ones, can act as repulsive axon guidance cues. This gene encodes a class 6 vertebrate transmembrane semaphorin that demonstrates alternative splicing. Several transcript variants have been identified and expression of the distinct encoded isoforms is thought to be regulated in a tissue- and development-dependent manner. [provided by RefSeq, Nov 2010]
A study in zebrafish and mouse demonstrated that the SEMA6D transcript, a semaphorin involved in retinal development, increased in relative abundance within 0.5 hours postmortem in mouse brain and liver tissues [Pozhitkov et al. DOI:10.1098/rsob.160267].