Basic Information

Symbol
SETDB2-PHF11
RNA class
mRNA
Alias
SETDB2-PHF11 Readthrough SETDB2-PHF11 Fusion Protein Variant 10 SETDB2-PHF11 Fusion Protein Variant 12 SETDB2-PHF11 Fusion Protein Variant 11 SETDB2-PHF11 Fusion Protein Variant 9 SETDB2-PHF11 Fusion Protein Variant 4 SETDB2-PHF11 Fusion Protein Variant 6 SETDB2-PHF11 Fusion Protein Variant 3 SETDB2-PHF11 Fusion Protein Variant 2 SETDB2-PHF11 Fusion Protein Variant 1 SETDB2-PHF11 Fusion Protein Variant 8 SETDB2-PHF11 Fusion Protein Variant 7 SETDB2-PHF11 Fusion Protein Variant 5 SETDB2-PHF11 Protein NCBI Gene: 107303344 UniProtKB/TrEMBL: X2BZC4 UniProtKB/TrEMBL: X2BYH4 UniProtKB/TrEMBL: X2BZ10 UniProtKB/TrEMBL: X2BZ07 UniProtKB/TrEMBL: X2BYC1 UniProtKB/TrEMBL: X2BYC0 UniProtKB/TrEMBL: X2BYT9 UniProtKB/TrEMBL: X2BYH1 UniProtKB/TrEMBL: X2BYB8 UniProtKB/TrEMBL: X2BYU0 UniProtKB/TrEMBL: X2BYH2 UniProtKB/TrEMBL: X2BZC3 GC13U901409 GC13P049446 GC13P049449 GC13P049462 GC13P049479 GC13P049490 GC13P049542 GC13P049564 GC13P049834 GC13P049875 GC13P049920 GC13P049973 GC13P050026 GC13P050079 GC13P050200 GC13P050245 GC13P050326 GC13P050422 GC13P050508 GC13P050625 GC13P050765 GC13P050903 GC13P051430 GC13P051706 GC13P052744
Location (GRCh38)
13:49444274-49528976
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
-
External database
NCBI

MANE select

Transcript ID
NM_001320727.2
Sequence length
3714.0 nt
GC content
0.4155

Transcripts

ID Sequence Length GC content
NM_001320727.2 NCBI
GGAGGUUACGCCUUCCCUCAUCCCCGGUAGAGGCAGGGCGGGACUGUUG… 3714 nt 0.4155
Summary

This gene represents naturally-occurring readthrough transcription between the upstream SETDB2 (SET domain bifurcated 2) gene to the downstream PHF11 (PHD finger protein 11) gene. Readthrough transcripts may encode fusion proteins with similarity to proteins encoded by each of the individual genes or may encode candidates for nonsense-mediated decay (NMD). [provided by RefSeq, Mar 2016]

Forensic Context

No relevant information is available at the moment.