Basic Information

Symbol
SLC47A1
RNA class
mRNA
Alias
Solute Carrier Family 47 Member 1 MATE1 Solute Carrier Family 47 (Multidrug And Toxin Extrusion), Member 1 Multidrug And Toxin Extrusion Protein 1 Multidrug And Toxin Extrusion 1 FLJ10847 HMATE-1 MATE-1
Location (GRCh38)
17:19495385-19579034
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Drug abuse diagnoses
External database
HGNC NCBI Ensembl OMIM UniProt GTEx

MANE select

Transcript ID
NM_018242.3
Sequence length
3280.0 nt
GC content
0.5012

Transcripts

ID Sequence Length GC content
NM_018242.3 NCBI
ACUGCCGGCCUGCGCGGUACUCACUGCCGGCCUCCGCGGUACCCACUGC… 3280 nt 0.5012
Summary

This gene is located within the Smith-Magenis syndrome region on chromosome 17. It encodes a protein of unknown function. [provided by RefSeq, Jul 2008]

Forensic Context

A study in human postmortem brain tissue from individuals with alcohol use disorder (AUD) demonstrated that the SLC47A1 was downregulated in the hippocampus of AUD subjects compared to controls [Lim et al. DOI:10.1038/s41398-021-01635-w].