Basic Information

Symbol
SNX5
RNA class
mRNA
Alias
Sorting Nexin 5 Sorting Nexin-5
Location (GRCh38)
Forensic tag(s)
Other applications

MANE select

Transcript ID
NM_014426.4
Sequence length
2341.0 nt
GC content
0.4635

Transcripts

ID Sequence Length GC content
CUUUCUCUAGACGCGUCUUGCUGGGAGAGUGUCCGUUGCUUCCCGUCCG… 2016 nt 0.4167
CUUUCUCUAGACGCGUCUUGCUGGGAGAGUGUCCGUUGCUUCCCGUCCG… 2341 nt 0.4635
CUUUCUCUAGACGCGUCUUGCUGGGAGAGUGUCCGUUGCUUCCCGUCCG… 2099 nt 0.4288
Summary

This gene encodes a member of the sorting nexin family. Members of this family contain a phox (PX) domain, which is a phosphoinositide binding domain, and are involved in intracellular trafficking. This protein functions in endosomal sorting, the phosphoinositide-signaling pathway, and macropinocytosis. This gene may play a role in the tumorigenesis of papillary thyroid carcinoma. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Sep 2013]

Forensic Context

A study in mice demonstrated that the SNX5 mRNA was down-regulated (0.15-fold) in bone marrow cells 6 hours after 6.5 Gy whole-body ionizing radiation, as identified by microarray analysis [Dai et al. DOI:10.1080/09553000600857389].