Basic Information

Symbol
SPECC1
RNA class
mRNA
Alias
Sperm Antigen With Calponin Homology And Coiled-Coil Domains 1 HCMOGT-1 CYTSB NSP Cytokinesis And Spindle Organization B Nuclear Structure Protein 5 Sperm Antigen HCMOGT-1 Cytospin-B FLJ36955 NSP5 Sperm Antigen With Calponin-Like And Coiled Coil Domains 1 Structure Protein NSP5a3a Structure Protein NSP5a3b Structure Protein NSP5b3a Structure Protein NSP5b3b Sperm Antigen HCMOGT 1 Cytospin B HCMOGT1
Location (GRCh38)
17:20008865-20319026
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
-
External database
HGNC NCBI Ensembl OMIM UniProt GTEx

MANE select

Transcript ID
NM_001243439.2
Sequence length
8255.0 nt
GC content
0.4972

Transcripts

ID Sequence Length GC content
NM_001386082.1 NCBI
GAGCAUCAGUGAGCGCCCGGAGCCGUGGCCGCUGGGGGUUGCGGCGGCG… 3928 nt 0.5104
NM_001386083.2 NCBI
GAGCAUCAGUGAGCGCCCGGAGCCGUGGCCGCUGGGGGUUGCGGCGGCG… 8512 nt 0.4979
NM_001386084.1 NCBI
GAGCAUCAGUGAGCGCCCGGAGCCGUGGCCGCUGGGGGUUGCGGCGGCG… 5266 nt 0.4556
NM_001386085.1 NCBI
GAGCAUCAGUGAGCGCCCGGAGCCGUGGCCGCUGGGGGUUGCGGCGGCG… 3871 nt 0.5089
NM_152904.4 NCBI
AGAAGCAGAAAAGGUUGGAUAAAAGAUAAGGACAGACCCACGAAGUCAA… 4992 nt 0.4453
Showing 11 to 15 of 15 entries
Summary

The protein encoded by this gene belongs to the cytospin-A family. It is localized in the nucleus, and highly expressed in testis and some cancer cell lines. A chromosomal translocation involving this gene and platelet-derived growth factor receptor, beta gene (PDGFRB) may be a cause of juvenile myelomonocytic leukemia. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Aug 2011]

Forensic Context

No relevant information is available at the moment.