Basic Information

Symbol
SSBP3
RNA class
mRNA
Alias
Single Stranded DNA Binding Protein 3 SSDP1 SSDP Single-Stranded DNA-Binding Protein 3 CSDP Sequence-Specific Single-Stranded-DNA-Binding Protein FLJ10355
Location (GRCh38)
1:54225432-54413479
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Mechanical injury analysis
External database
HGNC NCBI Ensembl OMIM UniProt GTEx

MANE select

Transcript ID
NM_145716.4
Sequence length
3252.0 nt
GC content
0.5514

Transcripts

ID Sequence Length GC content
NM_001009955.4 NCBI
AGACCAGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGUGCUGGAGGCGC… 3171 nt 0.5487
NM_001394360.1 NCBI
AGACCAGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGUGCUGGAGGCGC… 3195 nt 0.5484
NM_001394361.1 NCBI
AGACCAGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGUGCUGGAGGCGC… 3132 nt 0.5495
NM_001394362.1 NCBI
AGACCAGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGUGCUGGAGGCGC… 3111 nt 0.5474
NM_001394363.1 NCBI
AGACCAGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGUGCUGGAGGCGC… 3021 nt 0.5468
NM_001394364.1 NCBI
CUCUGGAGCUCCUUUUACUCUGGAAAGAACAUGACAGACAUCCUCUGCC… 2945 nt 0.5161
NM_001394365.1 NCBI
CUCUGGAGCUCCUUUUACUCUGGAAAGAACAUGACAGACAUCCUCUGCC… 2644 nt 0.5185
NM_001394366.1 NCBI
CUCUGGAGCUCCUUUUACUCUGGAAAGAACAUGACAGACAUCCUCUGCC… 2791 nt 0.5145
NM_001394367.1 NCBI
CUCUGGAGCUCCUUUUACUCUGGAAAGAACAUGACAGACAUCCUCUGCC… 2996 nt 0.5100
NM_018070.5 NCBI
AGACCAGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGUGCUGGAGGCGC… 3192 nt 0.5501
Showing 1 to 10 of 11 entries
Summary

Predicted to enable single-stranded DNA binding activity and transcription coactivator activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within hematopoietic progenitor cell differentiation. Predicted to be part of transcription regulator complex. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Jul 2025]

Forensic Context

A study in human traumatic brain injury (TBI) patients identified the SSBP3 as one of the top five downregulated long noncoding RNAs in brain contusion tissues compared to adjacent tissues, with a log2(fold change) of -5.85318, and this differential expression was validated by quantitative real-time PCR [Zhang et al. DOI:10.097/WNR.0000000000001756].