Basic Information

Symbol
SSX1
RNA class
mRNA
Alias
SSX Family Member 1 CT5.1 Synovial Sarcoma, X Breakpoint 1 Cancer/Testis Antigen Family 5, Member 1 Cancer/Testis Antigen 5.1 Protein SSX1 Sarcoma, Synovial, X-Chromosome-Related 1 SPGFX5 SSRC
Location (GRCh38)
Forensic tag(s)
-

MANE select

Transcript ID
NM_005635.4
Sequence length
1223.0 nt
GC content
0.4603

Transcripts

ID Sequence Length GC content
ACCACUGCUGCCGACCUCGCAACCACUGCUUUGUCUCUGAAUAGAGACA… 1309 nt 0.4675
ACCACUGCUGCCGACCUCGCAACCACUGCUUUGUCUCUGAAGUGAGACU… 1223 nt 0.4603
Summary

The product of this gene belongs to the family of highly homologous synovial sarcoma X (SSX) breakpoint proteins. These proteins may function as transcriptional repressors. They are also capable of eliciting spontaneous humoral and cellular immune responses in cancer patients, and are potentially useful targets in cancer vaccine-based immunotherapy. This gene, and also the SSX2 and SSX4 family members, have been involved in t(X;18)(p11.2;q11.2) translocations that are characteristically found in all synovial sarcomas. This translocation results in the fusion of the synovial sarcoma translocation gene on chromosome 18 to one of the SSX genes on chromosome X. The encoded hybrid proteins are likely responsible for transforming activity. Alternative splicing of this gene results in multiple transcript variants. A related pseudogene has been identified on chromosome X. [provided by RefSeq, Jul 2013]

Forensic Context

No relevant information is available at the moment.