Basic Information

Symbol
TBX3
RNA class
mRNA
Alias
T-Box Transcription Factor 3 TBX3-ISO XHL T-Box Transcription Factor TBX3 T-Box Protein 3 T-Box 3 UMS Bladder Cancer Related Protein XHL Ulnar Mammary Syndrome
Location (GRCh38)
Forensic tag(s)
Sudden unexpected death diagnosis Other applications

MANE select

Transcript ID
NM_005996.4
Sequence length
4733.0 nt
GC content
0.5248

Transcripts

ID Sequence Length GC content
AGACGCCCGGUGAAUUCUAGAGGCGGCGGAGGGUGGCGAGGAGCUCUCG… 4733 nt 0.5248
AGACGCCCGGUGAAUUCUAGAGGCGGCGGAGGGUGGCGAGGAGCUCUCG… 4793 nt 0.5243
Summary

This gene is a member of a phylogenetically conserved family of genes that share a common DNA-binding domain, the T-box. T-box genes encode transcription factors involved in the regulation of developmental processes. This protein is a transcriptional repressor and is thought to play a role in the anterior/posterior axis of the tetrapod forelimb. Mutations in this gene cause ulnar-mammary syndrome, affecting limb, apocrine gland, tooth, hair, and genital development. Alternative splicing of this gene results in three transcript variants encoding different isoforms; however, the full length nature of one variant has not been determined. [provided by RefSeq, Jul 2008]

Forensic Context

A study in humans identified a heterozygous, ultra-rare 3' UTR deletion in the TBX3 gene (c.*889_*891del) as a candidate variant for sudden unexplained death (SUD) predisposition, which was validated by a dual-luciferase reporter assay to significantly increase upstream gene expression [Wang et al. DOI:10.007/s00414-024-03329-6]. In a separate human study, the TBX3 transcription factor was identified as a direct target of Wnt/β-catenin signalling within fibroblast subclusters of the corpus cavernosum [Zhao et al. DOI:10.1038/s41467-022-31950-9].