Basic Information

Symbol
TRAF6
RNA class
mRNA
Alias
TNF Receptor Associated Factor 6 RNF85 RING Finger Protein 85 TNF Receptor-Associated Factor 6, E3 Ubiquitin Protein Ligase RING-Type E3 Ubiquitin Transferase TRAF6 E3 Ubiquitin-Protein Ligase TRAF6 TNF Receptor-Associated Factor 6 Interleukin-1 Signal Transducer EC 2.3.2.27 MGC:3310
Location (GRCh38)
Forensic tag(s)
Cause of death analysis

MANE select

Transcript ID
NM_004620.4
Sequence length
7885.0 nt
GC content
0.4115

Transcripts

ID Sequence Length GC content
AGCAGAGAAGGCGGAAGCAGUGGCGUCCGCAGCUGGGGCUUGGCCUGCG… 7885 nt 0.4115
AGCAGAGAAGGCGGAAGCAGUGGCGUCCGCAGCUGGGGCUUGGCCUGCG… 7978 nt 0.4108
Summary

The protein encoded by this gene is a member of the TNF receptor associated factor (TRAF) protein family. TRAF proteins are associated with, and mediate signal transduction from, members of the TNF receptor superfamily. This protein has an amino terminal RING domain which is followed by four zinc-finger motifs, a central coiled-coil region and a highly conserved carboxyl terminal domain, known as the TRAF-C domain and mediates signaling from members of the TNF receptor superfamily as well as the Toll/IL-1 family. Signals from receptors such as CD40, TNFSF11/RANCE and IL-1 have been shown to be mediated by this protein. This protein also interacts with various protein kinases including IRAK1/IRAK, SRC and PKCzeta, which provides a link between distinct signaling pathways. This protein functions as a signal transducer in the NF-kappaB pathway that activates IkappaB kinase (IKK) in response to proinflammatory cytokines. The interaction of this protein with UBE2N/UBC13, and UBE2V1/UEV1A, which are ubiquitin conjugating enzymes catalyzing the formation of polyubiquitin chains, has been found to be required for IKK activation by this protein. This protein also interacts with the transforming growth factor (TGF) beta receptor complex and is required for Smad-independent activation of the JNK and p38 kinases. The protein encoded by this gene is a key molecule in antiviral innate and antigen-specific immune responses. [provided by RefSeq, Nov 2021]

Forensic Context

A study in humans analyzing single-cell and bulk RNA-sequencing data from sepsis patients identified the IL-17 signaling pathway as a key mechanism, with pathway-associated genes including TRAF6 being significantly up-regulated in sepsis blood samples and specific T cell subsets compared to healthy controls [Zhao et al. DOI:10.1016/j.imbio.2023.152763].