Forensic RNA Knowledge Base

Basic Information

Symbol

TRANK1

RNA class

mRNA

Alias

Tetratricopeptide Repeat And Ankyrin Repeat Containing 1 LBA1 KIAA0342 TPR And Ankyrin Repeat-Containing Protein 1 Lupus Brain Antigen 1 Homolog Lupus Brain Antigen 1

Location (GRCh38)

3:36826817-36945057

UCSC Genome Browser Search in Marker Scope

Forensic tag(s)

Time since deposition estimation

External database

HGNC

NCBI

Ensembl

OMIM

UniProt

GTEx

MANE select

Transcript ID

NM_001329998.2

Sequence length

10611.0 nt

GC content

0.5031

Transcripts

ID	Sequence	Length	GC content
NM_001329998.2 NCBI	GGAAUAGGUCUGCGGCUGCACACCGCCCGGACGCCGGGGUUCCUGCGUC…	10611 nt	0.5031
NM_014831.3 NCBI	GGAAUAGGUCUGCGGCUGCACACCGCCCGGACGCCGGGGUUCCUGCGUC…	10479 nt	0.5032

Summary

No relevant information is available at the moment.

Forensic Context

A study in human blood samples stored at 4°C demonstrated that the TRANK1 was identified as one of 13 downregulated transcripts overlapping with important variables in a random forest model for predicting the time since deposition (TSD), achieving high predictive efficacy with an AUC of 0.995, precision of 1, and recall of 1 [Zhang et al. DOI:10.1016/j.forsciint.2024.111930].