Basic Information

Symbol
TRAPPC13
RNA class
mRNA
Alias
Trafficking Protein Particle Complex Subunit 13 C5orf44 Trafficking Protein Particle Complex 13 Trs65-Related FLJ13611 MGC48585 REV7-Interacting Novel NHEJ Regulator 1 Chromosome 5 Open Reading Frame 44 UPF0533 Protein C5orf44 SHLD3
Location (GRCh38)
5:65624789-65666233
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Drug abuse diagnoses
External database
HGNC NCBI Ensembl UniProt GTEx

MANE select

Transcript ID
NM_024941.4
Sequence length
2910.0 nt
GC content
0.3570

Transcripts

ID Sequence Length GC content
NM_001093755.2 NCBI
CCCCGUAGGCUGUGGGUCAAAAGUGCCGGUCAAAAUGGAAGUGAAUCCC… 2913 nt 0.3574
NM_001093756.2 NCBI
CCCCGUAGGCUGUGGGUCAAAAGUGCCGGUCAAAAUGGAAGUGAAUCCC… 2892 nt 0.3562
NM_001243737.2 NCBI
CCCCGUAGGCUGUGGGUCAAAAGUGCCGGUCAAAAUGGAAGUGAAUCCC… 2895 nt 0.3565
NM_001365342.1 NCBI
CCCCGUAGGCUGUGGGUCAAAAGUGCCGGUCAAAAUGGAAGUGAAUCCC… 2810 nt 0.3584
NM_001365343.1 NCBI
CCCCGUAGGCUGUGGGUCAAAAGUGCCGGUCAAAAUGGAAGUGAAUCCC… 2807 nt 0.3580
NM_024941.4 NCBI
CCCCGUAGGCUGUGGGUCAAAAGUGCCGGUCAAAAUGGAAGUGAAUCCC… 2910 nt 0.3570
Summary

Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport; vesicle coating; and vesicle tethering. Predicted to be located in cytosol. Predicted to be part of TRAPPIII protein complex. [provided by Alliance of Genome Resources, Jul 2025]

Forensic Context

A study in mice demonstrated that the TRAPPC13 gene was down-regulated across all seven brain regions examined in ethanol-naïve High Drinking in the Dark (HDID-1) mice compared to control HS/Npt mice, with fold changes ranging from -1.29 to -1.45 [Ferguson et al. DOI:10.1007/S12035-018-1252-0].