Forensic RNA Knowledge Base

Basic Information

Symbol

USP54

RNA class

mRNA

Alias

Ubiquitin Specific Peptidase 54 BA137L10.3 BA137L10.4 C10orf29 Ubiquitin Carboxyl-Terminal Hydrolase 54 Ubiquitin Specific Protease 54 FLJ37318 Inactive Ubiquitin Carboxyl-Terminal Hydrolase 54 Inactive Ubiquitin-Specific Peptidase 54 Chromosome 10 Open Reading Frame 29 Ubiquitin Specific Proteinase 54 Ubiquitin-Specific Peptidase 54 EC 3.4.19.12

Location (GRCh38)

10:73497538-73626117

UCSC Genome Browser Search in Marker Scope

Forensic tag(s)

Time since deposition estimation

External database

HGNC

NCBI

Ensembl

UniProt

GTEx

MANE select

Transcript ID

NM_001391956.1

Sequence length

6792.0 nt

GC content

0.4941

Transcripts

ID	Sequence	Length	GC content
NM_001320437.2 NCBI	AUCACUUGCCCCACAGAUACCCUCGUGAUUAGAGGUCUUUUGCUGGAGG…	6042 nt	0.5003
NM_001320441.2 NCBI	AUCACUUGCCCCACAGAUACCCUCGUGAUUAGAGGUCUUUUGCUGGAGG…	3197 nt	0.4636
NM_001350995.2 NCBI	GUAGCUAUAGCAGCCGCGGCGGUUAAGUAUGCGGCGCCAGGAGCUCUCU…	6143 nt	0.4986
NM_001378208.1 NCBI	GUAGCUAUAGCAGCCGCGGCGGUUAAGUAUGCGGCGCCAGGAGCUCUCU…	6723 nt	0.4920
NM_001378209.1 NCBI	AGACCUGCUCUAGACGCUGACUGAAUGUUUUCCUAGUUCCAAGUCCUGC…	6768 nt	0.4911
NM_001378210.1 NCBI	AUCACUUGCCCCACAGAUACCCUCGUGAUUAGAGGUCUUUUGCUGGAGG…	6057 nt	0.5004
NM_001391941.1 NCBI	GUAGCUAUAGCAGCCGCGGCGGUUAAGUAUGCGGCGCCAGGAGCUCUCU…	6960 nt	0.4927
NM_001391942.1 NCBI	GUAGCUAUAGCAGCCGCGGCGGUUAAGUAUGCGGCGCCAGGAGCUGCUA…	5917 nt	0.5013
NM_001391945.1 NCBI	GUAGCUAUAGCAGCCGCGGCGGUUAAGUAUGCGGCGCCAGGAGCUCUCU…	6601 nt	0.4949
NM_001391946.1 NCBI	GUAGCUAUAGCAGCCGCGGCGGUUAAGUAUGCGGCGCCAGGAGCUCUCU…	6263 nt	0.4986

Showing 1 to 10 of 21 entries

Summary

Enables K63-linked deubiquitinase activity and cysteine-type deubiquitinase activity. Predicted to be involved in protein deubiquitination and proteolysis. [provided by Alliance of Genome Resources, Jul 2025]

Forensic Context

A study in human body fluids using a custom MPS primer panel demonstrated that the USP54 was included in a refined primer panel (V4) for time since deposition estimation [Hänggi et al. DOI:10.1016/j.fsigen.2025.103415].