Forensic RNA Knowledge Base

Basic Information

Symbol

USP54

RNA class

mRNA

Alias

Ubiquitin Specific Peptidase 54 BA137L10.3 BA137L10.4 C10orf29 Ubiquitin Carboxyl-Terminal Hydrolase 54 Ubiquitin Specific Protease 54 FLJ37318 Inactive Ubiquitin Carboxyl-Terminal Hydrolase 54 Inactive Ubiquitin-Specific Peptidase 54 Chromosome 10 Open Reading Frame 29 Ubiquitin Specific Proteinase 54 Ubiquitin-Specific Peptidase 54 EC 3.4.19.12

Location (GRCh38)

10:73497538-73626117

UCSC Genome Browser Search in Marker Scope

Forensic tag(s)

Time since deposition estimation

External database

HGNC

NCBI

Ensembl

UniProt

GTEx

MANE select

Transcript ID

NM_001391956.1

Sequence length

6792.0 nt

GC content

0.4941

Transcripts

ID	Sequence	Length	GC content
NM_001391947.1 NCBI	GUAGCUAUAGCAGCCGCGGCGGUUAAGUAUGCGGCGCCAGGAGCUGCUA…	5896 nt	0.4998
NM_001391948.1 NCBI	GUAGCUAUAGCAGCCGCGGCGGUUAAGUAUGCGGCGCCAGGAGCUGCUA…	6037 nt	0.5012
NM_001391949.1 NCBI	GUAGCUAUAGCAGCCGCGGCGGUUAAGUAUGCGGCGCCAGGAGCUGCUA…	6067 nt	0.4996
NM_001391950.1 NCBI	GUAGCUAUAGCAGCCGCGGCGGUUAAGUAUGCGGCGCCAGGAGCUCUCU…	6122 nt	0.4972
NM_001391951.1 NCBI	GUAGCUAUAGCAGCCGCGGCGGUUAAGUAUGCGGCGCCAGGAGCUGCUA…	5758 nt	0.5031
NM_001391952.1 NCBI	GUAGCUAUAGCAGCCGCGGCGGUUAAGUAUGCGGCGCCAGGAGCUCUCU…	6631 nt	0.4934
NM_001391953.1 NCBI	GACUCGGAACUGGAUAAAGGGACCAGGCUACAUUGGGAAAGAAGUGGGA…	6464 nt	0.4980
NM_001391954.1 NCBI	GACUCGGAACUGGAUAAAGGGACCAGGCUACAUUGGGAAAGAAGUGGGA…	6631 nt	0.4945
NM_001391955.1 NCBI	AUCACUUGCCCCACAGAUACCCUCGUGAUUAGAGGUCUUUUGCUGGAGG…	6621 nt	0.4942
NM_001391956.1 NCBI	AUCACUUGCCCCACAGAUACCCUCGUGAUUAGAGGUCUUUUGCUGGAGG…	6792 nt	0.4941

Showing 11 to 20 of 21 entries

Summary

Enables K63-linked deubiquitinase activity and cysteine-type deubiquitinase activity. Predicted to be involved in protein deubiquitination and proteolysis. [provided by Alliance of Genome Resources, Jul 2025]

Forensic Context

A study in human body fluids using a custom MPS primer panel demonstrated that the USP54 was included in a refined primer panel (V4) for time since deposition estimation [Hänggi et al. DOI:10.1016/j.fsigen.2025.103415].