Basic Information

Symbol
circRAPGEF6
RNA Class
circRNA
Alias
Rap Guanine Nucleotide Exchange Factor 6 RA-GEF-2 PDZ-GEF2 PDZGEF2 PDZ Domain Containing Guanine Nucleotide Exchange Factor (GEF) 2 PDZ Domain-Containing Guanine Nucleotide Exchange Factor 2 Rap Guanine Nucleotide Exchange Factor (GEF) 6 PDZ Domain-Containing Guanine Nucleotide Exchange Factor I KIA001LB RAGEF2
Location (GRCh37)
5:130759766-130970853 UCSC Genome Browser
Location (GRCh38)
5:131424073-131635160
UCSC Genome Browser Search in Marker Scope
Host gene
RAPGEF6
Host category
mRNA
Forensic tag(s)
Drug abuse diagnoses
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_RAPGEF6_0005100 Exon-Exon chr5:130775361-130799974 chr5:131439668-131464281 48 nt 0.3125
hsa_RAPGEF6_0005300 Intron-Intron chr5:130775839-130777295 chr5:131440146-131441602 1457 nt 0.4207
hsa_RAPGEF6_0005400 Intron-Exon-Intron chr5:130777116-130867887 chr5:131441423-131532194 94 nt 0.4574
hsa_RAPGEF6_0005700 Exon-Exon chr5:130778042-130791705 chr5:131442349-131456012 189 nt 0.4709
hsa_RAPGEF6_0005800 Exon-Exon chr5:130778042-130799974 chr5:131442349-131464281 189 nt 0.4709
hsa_RAPGEF6_0005600 Exon-Exon chr5:130778042-130808437 chr5:131442349-131472744 1568 nt 0.4152
hsa_RAPGEF6_0005500 Exon-Exon chr5:130778042-130846184 chr5:131442349-131510491 250 nt 0.3880
hsa_RAPGEF6_0005900 Exon-Exon chr5:130778042-130857214 chr5:131442349-131521521 195 nt 0.4718
hsa_RAPGEF6_0006000 Exon-Exon chr5:130778042-130883883 chr5:131442349-131548190 144 nt 0.3750
hsa_RAPGEF6_0006400 Exon-Exon chr5:130782176-130788870 chr5:131446483-131453177 130 nt 0.4000
Showing 91 to 100 of 253 entries
Forensic Context

A study in mice demonstrated that the circRAPGEF6 was differentially expressed in methamphetamine-treated primary cortical neurons, with RNA sequencing indicating up-regulation, though qRT-PCR validation showed an opposite expression pattern [Li et al. DOI:10.1016/J.Neulet.2019.02.032].