Basic Information

Symbol
circRAPGEF6
RNA Class
circRNA
Alias
Rap Guanine Nucleotide Exchange Factor 6 RA-GEF-2 PDZ-GEF2 PDZGEF2 PDZ Domain Containing Guanine Nucleotide Exchange Factor (GEF) 2 PDZ Domain-Containing Guanine Nucleotide Exchange Factor 2 Rap Guanine Nucleotide Exchange Factor (GEF) 6 PDZ Domain-Containing Guanine Nucleotide Exchange Factor I KIA001LB RAGEF2
Location (GRCh37)
5:130759766-130970853 UCSC Genome Browser
Location (GRCh38)
5:131424073-131635160
UCSC Genome Browser Search in Marker Scope
Host gene
RAPGEF6
Host category
mRNA
Forensic tag(s)
Drug abuse diagnoses
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_RAPGEF6_0006500 Exon-Exon chr5:130782176-130797781 chr5:131446483-131462088 221 nt 0.4751
hsa_RAPGEF6_0006600 Exon-Exon chr5:130782176-130799974 chr5:131446483-131464281 126 nt 0.3651
hsa_RAPGEF6_0006200 Intron-Exon-Intron chr5:130782176-130806859 chr5:131446483-131471166 2572 nt 0.3764
hsa_RAPGEF6_0006700 Exon-Exon chr5:130782176-130828478 chr5:131446483-131492785 221 nt 0.4751
hsa_RAPGEF6_0006300 Exon-Exon chr5:130782176-130883883 chr5:131446483-131548190 250 nt 0.3320
hsa_RAPGEF6_0006900 Exon-Exon chr5:130785716-130799974 chr5:131450023-131464281 985 nt 0.3797
hsa_RAPGEF6_0007000 Exon-Exon chr5:130785716-130808437 chr5:131450023-131472744 182 nt 0.5165
hsa_RAPGEF6_0007100 Exon-Exon chr5:130785716-130846184 chr5:131450023-131510491 24 nt 0.6250
hsa_RAPGEF6_0007200 Exon-Exon chr5:130785716-130857214 chr5:131450023-131521521 280 nt 0.4429
hsa_RAPGEF6_0007300 Exon-Exon chr5:130785716-130883883 chr5:131450023-131548190 168 nt 0.4107
Showing 101 to 110 of 253 entries
Forensic Context

A study in mice demonstrated that the circRAPGEF6 was differentially expressed in methamphetamine-treated primary cortical neurons, with RNA sequencing indicating up-regulation, though qRT-PCR validation showed an opposite expression pattern [Li et al. DOI:10.1016/J.Neulet.2019.02.032].