Basic Information

Symbol
circRAPGEF6
RNA Class
circRNA
Alias
Rap Guanine Nucleotide Exchange Factor 6 RA-GEF-2 PDZ-GEF2 PDZGEF2 PDZ Domain Containing Guanine Nucleotide Exchange Factor (GEF) 2 PDZ Domain-Containing Guanine Nucleotide Exchange Factor 2 Rap Guanine Nucleotide Exchange Factor (GEF) 6 PDZ Domain-Containing Guanine Nucleotide Exchange Factor I KIA001LB RAGEF2
Location (GRCh37)
5:130759766-130970853 UCSC Genome Browser
Location (GRCh38)
5:131424073-131635160
UCSC Genome Browser Search in Marker Scope
Host gene
RAPGEF6
Host category
mRNA
Forensic tag(s)
Drug abuse diagnoses
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_RAPGEF6_0008600 Exon-Exon chr5:130788747-130797781 chr5:131453054-131462088 336 nt 0.3839
hsa_RAPGEF6_0008700 Exon-Exon chr5:130788747-130799974 chr5:131453054-131464281 336 nt 0.3839
hsa_RAPGEF6_0008200 Exon-Exon chr5:130788747-130815446 chr5:131453054-131479753 1375 nt 0.3840
hsa_RAPGEF6_0008300 Exon-Exon chr5:130788747-130825347 chr5:131453054-131489654 1484 nt 0.3780
hsa_RAPGEF6_0008400 Exon-Exon chr5:130788747-130831353 chr5:131453054-131495660 1796 nt 0.3853
hsa_RAPGEF6_0008500 Exon-Exon chr5:130788747-130834211 chr5:131453054-131498518 1872 nt 0.3846
hsa_RAPGEF6_0008800 Exon-Exon chr5:130788747-130834300 chr5:131453054-131498607 124 nt 0.3952
hsa_RAPGEF6_0008000 Exon-Exon chr5:130788747-130857180 chr5:131453054-131521487 2686 nt 0.3939
hsa_RAPGEF6_0008100 Intron-Exon-Intron chr5:130788747-130867887 chr5:131453054-131532194 250 nt 0.3400
hsa_RAPGEF6_0008900 Exon-Exon chr5:130788747-130883883 chr5:131453054-131548190 268 nt 0.3843
Showing 111 to 120 of 253 entries
Forensic Context

A study in mice demonstrated that the circRAPGEF6 was differentially expressed in methamphetamine-treated primary cortical neurons, with RNA sequencing indicating up-regulation, though qRT-PCR validation showed an opposite expression pattern [Li et al. DOI:10.1016/J.Neulet.2019.02.032].