Basic Information

Symbol
circRAPGEF6
RNA Class
circRNA
Alias
Rap Guanine Nucleotide Exchange Factor 6 RA-GEF-2 PDZ-GEF2 PDZGEF2 PDZ Domain Containing Guanine Nucleotide Exchange Factor (GEF) 2 PDZ Domain-Containing Guanine Nucleotide Exchange Factor 2 Rap Guanine Nucleotide Exchange Factor (GEF) 6 PDZ Domain-Containing Guanine Nucleotide Exchange Factor I KIA001LB RAGEF2
Location (GRCh37)
5:130759766-130970853 UCSC Genome Browser
Location (GRCh38)
5:131424073-131635160
UCSC Genome Browser Search in Marker Scope
Host gene
RAPGEF6
Host category
mRNA
Forensic tag(s)
Drug abuse diagnoses
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_RAPGEF6_0010100 Exon-Exon chr5:130797398-130857207 chr5:131461705-131521514 2377 nt 0.3959
hsa_RAPGEF6_0010200 Exon-Exon chr5:130797398-130857214 chr5:131461705-131521521 2384 nt 0.3964
hsa_RAPGEF6_0010300 Intron-Exon-Intron chr5:130797398-130857977 chr5:131461705-131522284 250 nt 0.2760
hsa_RAPGEF6_0010700 Exon-Exon chr5:130797673-130799974 chr5:131461980-131464281 350 nt 0.3800
hsa_RAPGEF6_0010800 Exon-Exon chr5:130799662-130828478 chr5:131463969-131492785 319 nt 0.3668
hsa_RAPGEF6_0011000 Exon-Exon chr5:130799734-130808437 chr5:131464041-131472744 158 nt 0.5000
hsa_RAPGEF6_0011100 Exon-Exon chr5:130799734-130815446 chr5:131464041-131479753 241 nt 0.3817
hsa_RAPGEF6_0011200 Exon-Exon chr5:130799734-130828478 chr5:131464041-131492785 241 nt 0.3817
hsa_RAPGEF6_0011300 Exon-Exon chr5:130799734-130846184 chr5:131464041-131510491 178 nt 0.4494
hsa_RAPGEF6_0010900 Exon-Exon chr5:130799734-130857214 chr5:131464041-131521521 2000 nt 0.4035
Showing 131 to 140 of 253 entries
Forensic Context

A study in mice demonstrated that the circRAPGEF6 was differentially expressed in methamphetamine-treated primary cortical neurons, with RNA sequencing indicating up-regulation, though qRT-PCR validation showed an opposite expression pattern [Li et al. DOI:10.1016/J.Neulet.2019.02.032].