Basic Information

Symbol
circSNX29
RNA Class
circRNA
Alias
Sorting Nexin 29 RUNDC2A RUN Domain-Containing Protein 2A RUN Domain Containing 2A Sorting Nexin-29 FLJ12363 A-388D4.1
Location (GRCh37)
16:12070602-12668146 UCSC Genome Browser
Location (GRCh38)
16:11976745-12574289
UCSC Genome Browser Search in Marker Scope
Host gene
SNX29
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SNX29_0000200 Exon-Exon chr16:12070602-12668146 chr16:11976745-12574289 250 nt 0.3920
hsa_SNX29_0000400 Intron-Exon-Intron chr16:12077423-12093215 chr16:11983566-11999358 250 nt 0.3680
hsa_SNX29_0000500 Intron-Exon-Intron chr16:12077423-12121301 chr16:11983566-12027444 250 nt 0.4320
hsa_SNX29_0001600 Exon-Exon chr16:12093154-12096900 chr16:11999297-12003043 115 nt 0.5043
hsa_SNX29_0001700 Exon-Exon chr16:12093154-12121301 chr16:11999297-12027444 240 nt 0.5458
hsa_SNX29_0001800 Exon-Exon chr16:12093154-12162989 chr16:11999297-12069132 1312 nt 0.5434
hsa_SNX29_0002500 Exon-Exon chr16:12096848-12146079 chr16:12002991-12052222 1055 nt 0.5346
hsa_SNX29_0003600 Exon-Exon chr16:12121177-12121301 chr16:12027320-12027444 125 nt 0.5840
hsa_SNX29_0003700 Exon-Exon chr16:12121177-12146083 chr16:12027320-12052226 1006 nt 0.5318
hsa_SNX29_0003800 Exon-Exon chr16:12121177-12618698 chr16:12027320-12524841 2196 nt 0.5392
Showing 1 to 10 of 234 entries
Forensic Context

A study in mice demonstrated that the circSNX29 is expressed at higher levels in embryonic skeletal muscle compared to adult tissue and its expression correlates with myoblast differentiation, where it functions as a sponge for miR-744 to increase Wnt5a and CaMKIId expression [Di Agostino et al. DOI:10.3389/fcell.2020.00389].