Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SNX29_0001700

Sequence Length

240 nt

GC Content

0.5458

GAUCACAGAACAAUGACAAAAGACAAUUUCUGCUGGAGCGACUGCUGGAUGCAGUGAAACAGUGCCAGAUCCGCUUUGGAGGGAGAAAGGAGAUUGCCUCGGAUUCCGACAGCAGGGUCACCUGUCUGUGUGCCCAGUUUGAAGCCGUCCUGCAGCAUGGCUUGAAGAGGAGUCGAGGAUUGGCACUCACAGCGGCAGCGAUCAAGCAGGCAGCGGGCUUUGCCAGCAAAACCGAAACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-70.00 kcal/mol

Ensemble Metrics

Free Energy: -74.77

Frequency: 0.0004

Diversity: 42.84

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.(((........)))............((((((.((.((.(((((....((.((((....((((((((((..((((........))))..)))).(((((.(((((.((((((((....)))).))))........(((.(((((((........))))))).))).))))))))))..)))))))))).))))))))).)).))))))..((.(((...))).))....)(......)

Thermodynamic Ensemble Prediction

(.,,,........}}.............{(((((.((.((.(((((,...((.((({...,(((((((((({.(,{{.{{{{.,,,,,,..,,)).||||.{(((((.((((((((....)))).))))........{((.(((((((......,.))))))).))}.))))))),))}})))))))))).))))))))).)).)))))}..((.(((...))).))....)(......)